I know this is becoming a monologue, as I figure out bits more as I go - apologies!
I have found the function the_content_limit, which has this code in it:
$content = get_the_content($more_link_text, $stripteaser, $more_file);
$content = apply_filters('the_content', $content);
$content = str_replace(']]>', ']]>', $content);
$content = strip_tags($content);
I have tried adding the following line at various points but it never strips out the pp_flashembed:
$content = strip_shortcodes($content);
How can this function be amended so it removes the pp_flashembed code which does, somehow, get removed from the RSS feed?